Annotation Overview for fig|85962.1.peg.86 in Helicobacter pylori 26695:
RNA polymerase sigma factor RpoD
| current assignment | RNA polymerase sigma factor RpoD | ||||
|---|---|---|---|---|---|
| taxonomy id | 85962 | contig | |||
| internal links | genome browser | feature evidence | sequence | ACH [?] | show essentially identical genes | ||
| annotation history | run tool | ||||
| data base cross references (dbxref) | |||||
This feature is part of a subsystem
Reasons for Current Assignment
We have assigned the function "RNA polymerase sigma factor RpoD" to the encoded protein. The
protein occurs in 2 subsystems: "Flagellum", and "Transcription initiation, bacterial sigma
factors". In "Flagellum", it appears to play a functional role that we have not associated with any
other gene. In "Transcription initiation, bacterial sigma factors", it appears to play a functional
role that we have not associated with any other gene. The function of genes having the same
functional roles have been described in Mycobacterium tuberculosis (7644534), (6269063), Salmonella typhimurium (3005129), Listeria monocytogenes (7828867), Pseudomonas aeruginosa (1902749), Rickettsia prowazekii (1427089), Enterococcus faecalis (8914262), Chlamydia trachomatis (2142944) and Bacillus subtilis (2987246). These are homologous proteins which implement the same function.
Compare Regions
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.
